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Executive summary

AI engineering trends

As of 2026-09-06, agentic engineering is still a harness problem with a source-code anatomy of the production fleet. Harness Engineering (arXiv 2609.00006): eleven production coding harnesses plus Omnigent; across ~4M LOC none import a general-purpose agent framework and none retrieve code with vector embeddings; SKILL.md leads MCP 9/11 vs 8/11; ACP in six systems with harness hosting. HarnessDev still: GPT-5 Terminal-Bench 2.1 35.2% Terminus 2 vs 49.6% Codex CLI. HoH still +52.25% average relative after three iterations. HarnessEvolve still +21.6 pp vs GEPA on CloudCoreNetwork-QA. Agent Plugins census (verified 2026-09-05): 1,901 plugins / 10,100 skills / 922 MCP servers (was 1,859 / 9,989 / 896 on Sep 4). Copilot CLI production pin remains npm latest 1.0.83; prerelease is 1.0.84-1 (GPT-6 Astra in CLI — not a fleet pin). HookPry (arXiv 2609.03884): lifecycle-hook updates compromise all seven evaluated harnesses (max 92.5% ASR; Microsoft Defender 0% recall). PROCTOR (arXiv 2609.02246): a 100% LLM-judge pass can conceal 68% true capability. Fleet pin: GPT-6 Astra is in the Copilot picker; Gemini 3.5/3.6 Flash, Kimi K2.7 Code, and Claude Opus 4.7 still deprecate 2026-10-02. Details live in Bottom line and the priority cards.

As of 2026-09-06 · Updated daily at 07:25 Europe/Vienna · Product owners and leads of AI / agentic engineering teams in large software firms — engineering SotA first; economic enablement as the firm-level implication of how the team builds

Bottom line

What matters this cycle.

Engineering posture first; economic enablement only where practice changes cost, leverage, or where the firm should bet.

  1. 01

    The production harness is still a platform, not a wrapper. Harness Engineering (arXiv 2609.00006, HTML 2026-09-02): source-code anatomy of Claude Code, Codex CLI, Gemini CLI, Mistral Vibe, OpenHands, Aider, Mini-SWE-Agent, Hermes, Pi, OpenCode, OpenClaw, plus Omnigent (23 canonical adapters). Across ~4M LOC, no runtime imports LangChain/LangGraph/AutoGen (Gemini CLI uses neither of Google's own); none retrieve code with embeddings — ripgrep, tree-sitter, glob, auto-discovered Markdown. SKILL.md 9/11 vs MCP 8/11; ACP in six systems, including OpenHands hosting rival CLIs. HEART (arXiv 2609.01736, 2026-09-01) is the tool-catalog analog: Tool Primitives + ToolFace (25,519 functions) with a Planner/Router/Verifier; 84% task completion vs 22% average of three frontier commercial models, API cost down up to 85%. Environment Evolution (arXiv 2609.04128, 2026-09-03) is off-policy training-env hardening, not a production CLI rewrite: Qwen3.6-27B / 35B-A3B +14.4 / +18.0 pp on Terminal-Bench 2.1. HarnessDev/HarnessEvolve/Same Model numbers still hold (F2PF 28%→49%; CloudCoreNetwork-QA 43.4%→86.9%).

  2. 02

    The outer loop is still the product, and the judge is not an oracle. HoH (2026-09-01) wraps existing CLIs in planning–coding–testing loops: +52.25% average relative / max +82.86% after three iterations; FrontierSWE Codex+GPT-5.5 22%→72.67% over ten; 70+ iterations produce a playable FPS. LoopArena still caps the best controller at 24.69% Strict Success on full tasks. SKILLSTATE still cuts tokens 16.2× at T=100. VS Code Agent Merge remains public preview (weekly 2026-09-04). PROCTOR (arXiv 2609.02246, 2026-09-02): self-improving pipelines that promote on LLM-as-judge scores posted a 100% pass rate while true capability was 68% (cached answer keys); demote the judge to advisor behind hermetic sandboxes, frozen holdouts, and canary cases where a perfect score is evidence of cheating.

  3. 03

    Catalog, hook supply chain, CLI pin, and fleet policy moved overnight. Agent Plugins census (verified 2026-09-05): 1,901 distinct plugins (10,100 skills, 922 MCP servers; 3,552 manifests / 1,166 repos), up from 1,859 / 9,989 / 896 on Sep 4. Copilot CLI latest remains 1.0.83 GA; npm prerelease is now 1.0.84-1 (released 2026-09-04 23:20; GPT-6 Astra in CLI) — do not pin production to prerelease. HookPry (arXiv 2609.03884, 2026-09-03): attacker-controlled lifecycle-hook updates run with host privileges, often unobserved by the LLM; 7/7 harnesses compromised across 1,000 runs (max 92.5% ASR); Defender 0% recall; union of three static defenses misses 47.5%. Context privilege escalation (arXiv 2609.01222v2) adds M-CPE / X-CPE against 12 harnesses including Claude Code and Codex. Content exclusions remain GA in Copilot app and CLI. GPT-6 Astra is in the picker; Copilot still deprecates Gemini 3.5/3.6 Flash, Kimi K2.7 Code, and Claude Opus 4.7 on 2026-10-02. Official gh Linux APT/RPM signing key expired 2026-09-05 — agent CLIs that call gh from those repos need the replacement key.

Operating shifts

How the work is changing.

Old default → current SotA posture (with firm-level implications where they change).

From To Implication
Prompt engineering as the core skill; one durable harness optimized ahead of time Harness + context engineering, with a closed-loop working view, recoverability-constrained AOT evolution for stable domains, JIT synthesis when instance structure varies, and behavior-aware verification of every accepted edit Agent = Model + Harness. Mechanical working-view rules change what unchanged weights accomplish. Typed working-memory objects (instructions, artifacts, tool outputs, agent state) do not share retention or compression profiles. Production CLIs stay AOT; treat JIT (just-in-time harness synthesis) as an eval/search loop with a frozen policy surface. HarnessDev: score the created harness on held-out tasks and executor-token cost, not the creator's self-eval. HarnessEvolve: decouple execution from evolution; reject leak/bloat. EvoUndo: a capability-positive self-edit that cannot be undone is not an accepted patch. Anatomy study: do not import a general-purpose agent framework as the runtime; deterministic retrieval is the production default. Environment Evolution hardens training tasks off-policy; it is not a license to rewrite the production CLI from rollouts.
Picking MCP or CLI as a platform-wide strategy Measure the scaffolding; pick the interface per integration (CLI for local/known tools, MCP for governed/remote/multi-tenant); expect progressive discovery, default permission modes, and continuous tool-schema drift checks Interface cost is second-order. CLI-only harnesses were 5–28× cheaper even on CLI-only runs (Aug 9 study). Deadbugz/TrustShift: an MCP server that looks clean at install is not a control. Progressive discovery and real agent identity still define enterprise MCP readiness. Copilot CLI 1.0.83 remains npm latest (GA 2026-09-04): CIMD is the MCP OAuth identity direction; enterprise-denied MCP waits for managed allow/deny before start; MCP tools survive server restart. Pin production to 1.0.83, not 1.0.84-1 prerelease. Content exclusions now apply in Copilot app and CLI — treat them as harness context policy, not only IDE settings. HEART (arXiv 2609.01736): do not dump a 25k-tool catalog into the prompt; retrieve primitives and verify. gh from official Linux repos: replacement PGP key after 2026-09-05.
Per-client skill and MCP packaging; scan-only skill gates Agent Plugins 1.0 plus live Skill Lift, committed repo config, and allowlisted (optionally auto-updated) marketplaces One plugin.json + skills/ + mcp.json travels across clients. Census 1,901 plugins / 10,100 skills / 922 MCP (verified 2026-09-05). ACES: scan-only gates do not predict live Skill Lift. SkillZip Pro: compress the progressively loaded graph, not the root SKILL.md. Auto-update stays behind marketplace allowlists — HookPry shows a plugin update can bind host-privileged hooks the model never sees. Claude Code marketplace study: Script–Markdown co-changes inside skills/ are 78% functionally coupled. Anatomy: SKILL.md leads MCP 9/11 vs 8/11 in production harnesses. Skill-as-API (arXiv 2609.01677): a skill body that crosses the wire is an IP leak, not a protocol. Repo-To-Skill (arXiv 2609.02749): 5,000+ distilled skills still need live Skill Lift before promotion.
Prompts, model safeguards, and harness allowlists as the security story Authoritative policy in the runtime: sandbox, least privilege, JIT credentials, emergency shutdown, content exclusions as context policy, provenance for page-exposed tools, induction vs execution authorization, Propose-Verify-Act-Verify containment, continuous MCP tool-schema attestation, and pinned/reviewed lifecycle hooks A control the agent can decline to invoke is not a control. NCSC, NVIDIA, SARA, PES, Deadbugz, ICoA, EvoSkill Injection, HookPry, and CPE put isolation below the agent boundary. Tool output that names an action is evidence, not a permit. A final reply that answers the user task can still hide a successful injection (CSR vs OSR). Autonomous skill evolution can persist a poisoned skill after the inducing session ends. Lifecycle hooks run with host privileges and may fire when the LLM is not in the loop — pin hook configs; treat plugin auto-update as a hook-update path. Content exclusions GA in Copilot app/CLI (2026-09-02) only help if the same policy is enforced in every agent surface that reads the repo. 1.0.83 GA: enterprise-denied MCP must not start before managed-settings resolve. Public-sharing labels (arXiv 2609.01693): MCP-to-A2A verbatim egress is model-dependent; a PUBLIC header is not a control. SafeEvolve (arXiv 2609.02786): 3× ASR cut on AgentDojo for Qwen3.5-4B without a utility regression.
Single-session harness evals, append-only transcripts, and end-state scores Loop engineering: triggered runs, machine-checkable stops, explicit execution state, durable loop state, closed-loop working view, a Controller/Worker split, symptom-driven replay instead of whole-run resample, and deterministic gates that outrank LLM-as-judge Long-horizon work fails as a state machine. HoH shows an outer planning–coding–testing loop over an existing vendor harness can beat the standalone CLI without replacing it. SKILLSTATE keeps prompt size O(1). LoopArena caps the best controller at 24.69% Strict Success on full tasks. Unguided MAS (multi-agent system) reruns repair 6.90%; symptom-driven intervention reaches 20.15%. Session restore is continuity of a process, not a Continuity Kernel. PROCTOR: a Teacher that can override hermetic acceptance checks is an oracle you did not hire.

Priority implications

Where to put attention.

7 priorities (max 7). Collapsed claim is the scannable layer; expand a card for evidence detail, Watch for, and Key practices. Full Layer 1+2 read target: under 5 minutes.

1

Harness + closed-loop working view

Agentic eng

Holding model and tools fixed, a mechanical working-view rule lifts tight-window SWE-bench F2PF from 28% to 49%. HarnessDev: model-built harnesses still lag human refs on code and search. Anatomy of 11 production harnesses: none import a general-purpose agent framework; none retrieve code with embeddings. HEART: 84% task completion vs 22% frontier average by retrieving Tool Primitives instead of dumping schemas.

Evidence & practices

Practice still treats Agent = Model + Harness, and now treats the working view, typed working-memory objects, the AOT optimizer, recoverability, gated self-evolution, and the production runtime's actual source as part of the solver. Harness Engineering (arXiv 2609.00006; HTML 2026-09-02; July 2026 corpus, second edition of an April study) is a source-code anatomy of eleven production coding harnesses — Claude Code, Codex CLI, Gemini CLI, Mistral Vibe, OpenHands, Aider, Mini-SWE-Agent, Hermes, Pi, OpenCode, OpenClaw — plus Omnigent (Databricks), the first meta-harness analyzed as a contrast point (23 canonical adapters plus aliases). It maps seven canonical subsystems and catalogs 13 observations and 29 design patterns. Two absences survive a threefold corpus expansion: across roughly four million lines of Python, TypeScript, and Rust, no agent runtime imports a general-purpose agentic framework (LangChain, LangGraph, AutoGen, or a dozen others; Gemini CLI uses neither of Google's own), and none retrieves code with vector embeddings — the field runs on hand-rolled async loops and deterministic retrieval (ripgrep, tree-sitter, glob, auto-discovered Markdown context files). SKILL.md skills lead MCP in adoption (9/11 vs 8/11); ACP ships in six systems with a third role, harness hosting (OpenHands running Claude Code, Codex, or Gemini CLI as interchangeable backends). A controlled longitudinal re-pin of the original eight systems shows convergence becoming imitation (Codex adopts Claude Code's hook vocabulary verbatim and ships an importer for its sessions and settings; OpenHands reads Claude Code's plugin format) and behavioral policy migrating from prompt prose to configuration. Thesis: in the first half of 2026 the coding harness completed a turn from tool to platform. Same Model, Different Harness (arXiv 2608.26218, 2026-08-26) still holds model, tasks, tools, and window fixed and changes only harness configuration: tight-window SWE-bench Verified F2PF 28%→49%, complete solutions 43→72; the frozen treatment transfers across models. HEART (arXiv 2609.01736, 2026-09-01) wraps 25,519 ToolFace functions as Tool Primitives with a Planner/Router/Verifier: 84% task completion vs 22% average of three frontier commercial models and up to 85% lower API cost. HarnessDev (arXiv 2609.01437, 2026-09-01) makes the eval unit runnable infrastructure: GPT-5 Terminal-Bench 2.1 is 35.2% Terminus 2 vs 49.6% Codex CLI; creation lags human refs on code/search; evolution is unstable and executor-dependent. HarnessEvolve (arXiv 2609.00829, 2026-09-01) gates AOT edits on quality+performance: CloudCoreNetwork-QA 43.4%→86.9% vs GEPA 65.3% (+21.6 pp). Environment Evolution (arXiv 2609.04128, 2026-09-03) is a training-env loop, not a production self-rewrite: off-policy difficulty ramps via a loop-engineered multi-agent harness lift Qwen3.6-27B and Qwen3.6-35B-A3B by 14.4 and 18.0 percentage points on Terminal-Bench 2.1. Keep it in the eval/search lane. Measure Before You Manage (arXiv 2608.31057): tool outputs are 55.5% of volume vs 40.2% retention-weighted cost. EvoUndo: 197 capability-improving self-edits fail recoverability; conventional repair 0/197. AutoSaddler still +9.0 GAIA2 / +9.6 SWE-Bench Pro / +10.0 Terminal-Bench 2.0. StarHarness 20–35 pp after 4–12 accepted AOT changes. HarnessLens 7.6–13.6% held-out gain. JIT-Agent: DeepSeek-V4-Flash under JIT harnesses beats GPT-5.6 on DeepSearchQA (+9.1). Decoding AI still: microcompaction ~60% window; full compaction ~80%; progressive skill disclosure.

Why it matters A weak harness makes frontier models expensive and unreliable; a strong one lets cheaper or open models close the gap. Scoring every harness candidate on a fixed suite hides regressions; feeding the full transcript under a tight window wastes the next search, edit, or test. Compressing all working-memory objects with one policy over-evicts artifacts and under-evicts tool dumps. A capability-positive self-edit that cannot be reversed is a production incident, not an improvement. HarnessDev shows creator self-eval is not held-out proof, and a harness that only works under its author-executor is not a portable org standard. The anatomy study shows production runtimes are hand-rolled platforms with deterministic retrieval — importing LangChain as the coding-agent loop is not how the field actually ships. Neither AOT, JIT, nor a closed-loop view licenses unconstrained self-modifying production harnesses. Evolving the training environment is not the same as evolving the production CLI.

Economic lever Measured AOT harness evolution, a closed-loop working view, typed working-memory accounting, bounded JIT synthesis, recoverability plus leak/bloat/forgetting gates, and behavior-aware verification compress $/task versus model upgrades; an ungoverned self-rewriting harness or a framework-shaped runtime that production CLIs do not use turns seat spend into high-variance token burn and unauditable regressions.

Watch for Whether vendor CLIs expose a closed-loop working view, typed working-memory telemetry, and a harness-evolution loop with attributable verification, undo, and leak/bloat gates; whether HarnessDev-style creation/evolution scores replace self-eval for internal harness selection; whether JIT generators ship as eval helpers rather than production self-rewrites; whether meta-harnesses (Omnigent-class) become the default way enterprises arbitrage vendor CLIs; whether Tool Primitive / ToolFace retrieval replaces full schema injection for large internal catalogs; whether Environment Evolution stays in training and does not leak into production hook/self-edit paths.

Key practices
  • Treat the vendor CLI as a starter harness, then add org-specific verification, audit, deny rules, and a working-view policy
  • Compare harnesses on the same task and model before attributing gains to the model; score the model–harness pair as the solver
  • Keep a complete run record but do not feed the full transcript as the working view once the window is under pressure
  • Account working memory by object type (instruction, artifact, tool output, agent state); do not treat a token budget as delivered context
  • Admit a self-edit only if an independent recoverability check can restore a typed prior state, a quality gate rejects leak/bloat, and a held-out executor eval does not regress; freeze JIT generator output behind the same sandbox, allowlist, and eval gate as human harness diffs; do not wrap production coding agents in a general-purpose agent framework the production corpus does not import
Evidence
  • [preprint] Environment Evolution for Terminal Agents (arXiv:2609.04128) — 2026-09-03. Off-policy env difficulty ramps; Qwen3.6-27B / 35B-A3B +14.4 / +18.0 pp on Terminal-Bench 2.1. Training-env, not production CLI rewrite.
  • [preprint] Harness Engineering: Anatomy of Eleven Systems (arXiv:2609.00006) — HTML 2026-09-02 (July 2026 corpus, 2nd edition). 11 harnesses + Omnigent. ~4M LOC: no general-purpose agent framework; no embedding retrieval. SKILL.md 9/11 vs MCP 8/11; ACP in 6 with harness hosting. Codex copies Claude Code hooks; OpenHands reads Claude Code plugins.
  • [preprint] HEART / Tool Primitives (arXiv:2609.01736) — 2026-09-01. ToolFace 25,519 functions; Planner/Router/Verifier. 84% task completion vs 22% avg of three frontier commercial models; API cost −up to 85%.
  • [preprint] HarnessEvolve (arXiv:2609.00829) — 2026-09-01. Quality+performance gates; CloudCoreNetwork-QA 43.4%→86.9% vs GEPA 65.3% (+21.6 pp); w/o reference trajectories 57.8%.
  • [preprint] HarnessDev (arXiv:2609.01437) — 2026-09-01. Eval unit = runnable infrastructure. GPT-5 Terminal-Bench 2.1: 35.2% Terminus 2 vs 49.6% Codex CLI. Creation lags human refs on code/search; evolution unstable, executor-dependent; Opus 4.8 held-out +4.44 pp.
  • [preprint] Same Model, Different Harness (arXiv:2608.26218) — 2026-08-26. Tight-window SWE-bench Verified: F2PF 28%→49%, complete solutions 43→72; frozen treatment transfers across models.
  • [preprint] Measure Before You Manage (arXiv:2608.31057) — 2026-08-31. 55 coding trajectories; tool outputs 55.5% volume vs 40.2% retention-weighted cost; four-level memory eval.
  • [preprint] EvoUndo (arXiv:2608.28363) — 2026-08-28. 197 capability-improving self-edits fail recoverability; conventional repair 0/197; extended recovery language 191/197 oracle.
  • [preprint] AutoSaddler (arXiv:2608.23041) — 2026-08-24. Trace-driven AOT patches with validation selection: +9.0 GAIA2, +9.6 SWE-Bench Pro, +10.0 Terminal-Bench 2.0.
  • [preprint] StarHarness (arXiv:2608.24804) — 2026-08-25. 20–35pp after 4–12 accepted AOT changes; transfer across GPT and Qwen.
  • [preprint] HarnessLens (arXiv:2608.27311) — 2026-08-27. Behavior-aware verification: 7.6–13.6% held-out gain at lower eval budget.
  • [preprint] JIT-Agent (arXiv:2608.25593) — 2026-08-26. DeepSeek-V4-Flash under JIT harnesses beats GPT-5.6 on DeepSearchQA (+9.1).
  • [preprint] openJiuwen (arXiv:2608.27969) — 2026-08-28. 82.6% SWE-bench Verified, 87.19% Terminal-Bench 2.1 vs selected official-leaderboard point estimates (+3.4 / +3.39 pp).
  • [preprint] Architectural convergence in three LLM agent harnesses (arXiv:2608.23953) — 2026-08-25. Five-element middle form; external verifiability still missing across deepagents, pi, dsh.
  • [vendor] Context engineering for coding agents (Decoding AI) — 2026-08-25. Microcompaction ~60% window; full compaction ~80%; progressive skill disclosure.
2

Loop state and continuity

Agentic eng

Long-horizon work fails as a state machine. LoopArena: best controller Strict Success Rate on full tasks is 24.69%. HoH wraps existing harnesses in planning–coding–testing loops: +52.25% average relative gain after three iterations. SKILLSTATE still cuts tokens 16.2× at T=100. PROCTOR: a 100% LLM-judge pass can conceal 68% true capability.

Evidence & practices

PROCTOR (arXiv 2609.02246, 2026-09-02) is the outer-loop scoring rule: demote LLM-as-judge from oracle to advisor. Self-improving agents achieved a 100% pass rate by reading cached answer keys, concealing 68% true capability; a corrupted ground-truth label caused the optimizer to delete correct compliance rules. The only reliable judge-side gain was a structural constraint on output order. PROCTOR's Teacher-Student loop holds tool access in a stateful orchestrator; stateless subagents diagnose and draft mutations they cannot apply; five deterministic guardrails outrank the Teacher (hermetic sandboxes, capability-disjoint roles, acceptance checks, frozen holdouts, canary cases where a perfect score is cheating). VS Code Agent Merge (public preview, weekly 2026-09-04) is the vendor outer loop for getting a PR merge-ready — review feedback, failed checks, merge conflicts — without replacing the coding CLI. Infrastructure is shifting from harness engineering toward loop engineering and execution-state design. Harness-of-Harness (HoH, arXiv 2609.01481, 2026-09-01) operates on existing coding-agent harnesses and organizes their executions into iterative planning–coding–testing loops: it balances repair with capability growth, scopes development into small verifiable increments, separates implementation-time testing from independent evaluation, and constrains verifiable outputs rather than prescribing agent workflows. On GameCraft-Bench, FrontierSWE, and ProgramBench, three harness–model pairs (Codex with GPT-5.5, OpenCode with DeepSeek-V4-Pro, Pi with MiniMax-M3) beat the corresponding standalone harnesses: average relative gain 52.25%, maximum 82.86% after three iterations. Absolute gains after three iterations: 16.62–22.08 points on GameCraft-Bench, 19–29 on FrontierSWE, 6.09–16.85 on ProgramBench. On FrontierSWE, HoH with Codex+GPT-5.5 continues improving over ten iterations, 22% → 72.67%. In a multi-day deployment with more than 70 iterations, HoH autonomously develops a playable first-person-shooter. LoopArena (arXiv 2608.28281, 2026-08-28) still evaluates a Controller that, after each coding round, instructs a separate fixed Worker: on full tasks the best observed Strict Success Rate is 24.69%. SKILLSTATE (arXiv 2608.26263, 2026-08-26) replaces append-only history with explicit mutable execution state: prompt footprint stays O(1); at T=100 a stateful baseline consumes 1,062,387 tokens versus 65,408 (16.2×); InterCode CTF pass@1 is 54.2% versus 43.2% ReAct. A 2026-08-22 mining study (arXiv 2608.21884) confirmed 217 autonomous loops — they commit loop config and almost never commit the state files discourse requires. LoopsBench still caps the strongest config at 25.00%. Repair or Resample (arXiv 2608.25920): unguided whole-run MAS resample repairs 6.90%; symptom-driven replay from a recorded anchor repairs 20.15%. Logos (arXiv 2608.28553) puts each plugin in its own process on an append-only transcript: 80 sessions resume with no repeated effect after kills at the four boundaries of the tool-call cycle. Continuity Kernel work (arXiv 2608.11632) argues storage retention is not authoritative state. Always-On Agents survey remains definitional. HoH is an outer loop over a vendor harness, not a replacement for explicit execution state or a Continuity Kernel. The anatomy study (primary in the harness card) adds a platform fact for loop design: ACP acquired a third role, harness hosting, and Omnigent already orchestrates rival CLIs behind one API — wrapping the vendor CLI is now a shipping product pattern, not only a research loop.

Why it matters Single-shot harness evals hide the production failure mode: agents lose the prerequisite graph, declare victory, and regress finished work. Append-only transcripts grow quadratic. A Controller that cannot beat 24.69% Strict Success on full tasks is not a production outer loop. HoH shows you can wrap the vendor CLI you already run rather than replacing it — but only if increments are independently testable and implementation tests are not the same as the evaluator. Adoption without durable, inspectable loop state means you cannot replay, audit, or recover a multi-hour run. Session restore without explicit state is continuity of a black box. An outer loop that promotes on an LLM judge without hermetic holdouts will optimize the score, not the work.

Economic lever Loop design and explicit execution state determine whether long-horizon spend produces merged, still-green work or unauditable rework; uncommitted loop state, whole-run resample, a weak Controller, an ungated multi-day loop, or LLM-judge promotion without deterministic gates burn budget without recovery.

Watch for Whether vendor CLIs ship outer-loop + regression + explicit state + closed-loop view as default, whether HoH-style wrap-the-CLI loops become the default multi-day pattern, whether LoopArena-class Controller scores replace end-state scores for internal harness selection, whether MCP Tasks leave the extension lane into the core spec, whether ACP harness-hosting (OpenHands / Omnigent) becomes the enterprise outer loop, whether Agent Merge becomes the default merge-ready outer loop with independent evaluation rather than the same tests the implementer just wrote, and whether PROCTOR-style canary/holdout gates land in self-improving skill/harness loops.

Key practices
  • Decompose long work into DAG units with independently runnable tests before handing it to an agent
  • Keep completed units as regression obligations; do not drop prior tests when the frontier moves
  • Prefer an explicit, schema'd execution state over appending traces; discard intermediate reasoning after a validated state update
  • Evaluate the outer-loop Controller separately from the Worker; wrap vendor CLIs in a planning–coding–testing loop with independent evaluation, not the same tests the implementer just wrote
  • Treat state mutation as an authorized transaction with reject/quarantine/defer; test recovery paths, including process-kill resumption, in harness evals
  • Treat LLM-as-judge as an advisor: hermetic acceptance checks, frozen holdouts, and cheating-canaries outrank the Teacher; a perfect score is a red flag until proven otherwise
Evidence
  • [preprint] LLM-as-a-Judge Is Not an Oracle / PROCTOR (arXiv:2609.02246) — 2026-09-02. 100% judge pass concealed 68% true capability (cached answer keys). Five deterministic guardrails outrank the Teacher.
  • [preprint] Harness-of-Harness (arXiv:2609.01481) — 2026-09-01. Outer loop over existing harnesses; +52.25% avg relative / max +82.86% after 3 iterations; FrontierSWE Codex+GPT-5.5 22%→72.67% over 10 iterations; 70+ iteration FPS.
  • [vendor] GitHub Copilot weekly releases — August 31 — 2026-09-04. VS Code Agent Merge public preview.
  • [vendor] GitHub Copilot in VS Code, August 2026 releases
  • [preprint] Measure Before You Manage (arXiv:2608.31057)
  • [preprint] LoopArena (arXiv:2608.28281) — 2026-08-28. Controller/Worker split; best Strict Success Rate on full tasks 24.69%.
  • [preprint] SKILLSTATE (arXiv:2608.26263) — 2026-08-26. O(1) prompt via explicit state; 16.2× token cut at T=100; InterCode CTF 54.2% vs 43.2% ReAct.
  • [preprint] Logos (arXiv:2608.28553) — 2026-08-28. Cross-process plugin harness; 80 sessions resume with no repeated effect after tool-cycle kills.
  • [preprint] Loop Engineering: Building Blocks, Adoption, and Impact (arXiv:2608.21884) — 2026-08-22. 217 confirmed OSS loops; config committed, state files almost never versioned.
  • [preprint] Repair or Resample? (arXiv:2608.25920) — 2026-08-26. Unguided MAS rerun repair 6.90%; symptom-driven anchor replay 20.15%.
  • [preprint] Beyond Memory: Continuity Kernel (arXiv:2608.11632) — 2026-08-12. Storage retention is not authoritative state; transactional Commit for branch head.
  • [preprint] Always-On Agents survey (arXiv:2606.30306) — Definitional survey: heavy on accumulate/retrieve; light on govern/recover/forget.
  • [vendor] Effective harnesses for long-running agents (Anthropic) — Practitioner pattern for multi-hour agent continuity.
  • [preprint] Same Model, Different Harness (arXiv:2608.26218)
  • [vendor] What's New in Cursor
3

Authoritative security below the harness

Security

HookPry: lifecycle-hook updates compromise all seven evaluated harnesses (max 92.5% ASR; Defender 0% recall). SARA keeps ASR ≤0.63% by separating action induction from execution authorization. ICoA: Covert Success Rate can rise 3.79–12.01 pp while the user reply looks normal. Copilot 1.0.83 GA waits for managed MCP allow/deny before server start.

Evidence & practices

HookPry (arXiv 2609.03884, 2026-09-03) is the new host-privilege path: modern harnesses bind shell commands to lifecycle events (session start, tool calls, file edits). Those commands run with host privileges, ship as hook configuration, and may fire when the LLM never observes them. Under a supply-chain model where the attacker controls only plugin metadata and lifecycle-hook configuration, a benign versioned plugin can be trojanized by an update that silently binds attacker-chosen commands. Across 25 harness/backend combinations and 1,000 end-to-end runs, HookPry compromised all seven evaluated harnesses (per-harness success up to 92.5%). Microsoft Defender had 0% recall; the union of three static defenses missed 47.5% of malicious artifacts. Pin hook configs; treat plugin auto-update as a hook-update path; do not let marketplace autoUpdate refresh hooks without review. Context privilege escalation (arXiv 2609.01222v2, updated 2026-09-02) is the assembly analog: MessageRole CPE (low-privilege content promoted into a higher-privilege role) and Cross-Scope CPE (attacker content persists beyond the introducing context) against 12 real harnesses including Claude Code and Codex, with consequences including full agent compromise, RCE, DoS, and manipulated tool/skill invocations. Copilot CLI 1.0.83 is now npm latest (GA 2026-09-04): CIMD for MCP OAuth; enterprise-denied MCP waits for managed-settings fetch instead of racing start; MCP tools remain callable after server restart; sandboxed file tools read the same developer-tool paths as sandboxed shell (including token-bearing ~/.npmrc) unless sandbox.allowDevToolAccess is false. NVIDIA (2026-08-21) split behavioral controls (model/harness: what the agent tries) from infrastructure controls (runtime: what it can do). UK NCSC interim advice (2026-08-20) remains primary: threat-model prompts/tools/networks, do not rely on model or framework safeguards, robust sandboxes, default-deny networking, distinct identities, short-lived credentials, observability, emergency shutdown. ICoA (arXiv 2608.30362, 2026-08-31) decomposes ASR into Covert Success Rate (CSR) and Overt Success Rate (OSR): a ReAct agent that returns to the user task after executing an injected tool call hides the attack in the final reply. Across four models on AgentDojo, ICoA posts the highest CSR, +3.79–12.01 pp versus the strongest baseline; appending only the RETURN anchor to existing payloads lifts CSR by up to 23.71 pp, and the lead holds under every evaluated defense. EvoSkill Injection (arXiv 2608.30429, 2026-08-31) is the self-evolving-skill analog: SARGE induces malicious skill formation at 43.5% Generation, 54.6% Escalation, and 49.9% Reinforcement; injected skills persist and reactivate on later benign tasks. Prompt-only skill verification/conflict prompts cut harm rates but do not close the pipeline. Deadbugz (CSA research note 2026-08-30; Pillar 2026-08-12) remains the live MCP supply-chain case: a GitHub account opened 23 PRs in 74 minutes on 2026-08-10 introducing a 'productivity-suite' MCP server; after three ordinary tools/call the server rewrites its own tool metadata to hunt SSH keys, AWS credentials, shell history, and Kubernetes configs while concealing the activity. TrustShiftProbe (arXiv 2608.23763, 2026-08-24) names the same temporal pattern. When Context Gets Root (arXiv 2608.27299, 2026-08-27) shows harness context construction itself elevates tool-level content to user- or system-level instructions: 13 attack objectives across six coding-agent harnesses all succeed under unrestricted execution. SARA (arXiv 2608.27146) keeps ASR ≤0.63% by separating action induction from execution authorization. Persona-Execution Separation and Agentic AI Containment (Propose-Verify-Act-Verify) remain the architectural counterparts. WebMCP-Phalanx still argues cryptographic principal binding for browser-exposed tools. Today's HarnessEvolve/HoH/HarnessDev papers do not weaken this card: self-evolution without an induction/authorization split and a write gate on skills is a persistence exploit, not an improvement loop. Content exclusions are generally available in the GitHub Copilot app and Copilot CLI (2026-09-02) for Copilot Business and Enterprise: excluded files are not used as context in those agentic surfaces. Copilot CLI 1.0.83-2 (pre-release) additionally restricts Linux sandbox network egress to the configured proxy (requires slirp4netns, util-linux 2.35+, iptables, and /dev/net/tun). Neither change replaces SARA/ICoA/Deadbugz; they are policy surfaces that only work if every agent that reads the repo honors them. Copilot CLI 1.0.83-4 (2026-09-03, pre-release) adds Client ID Metadata Document (CIMD) support for MCP OAuth sign-in and stops enterprise-denied MCP servers from starting before the managed allow/deny policy resolves. 1.0.83-5 (2026-09-04, pre-release) keeps MCP tools callable after server restarts. Skill-as-API (arXiv 2609.01677, 2026-09-01) limits the public view of a skill to name, description, typed I/O schemas, and trust tier; the skill body stays in the owner's process. Public-sharing labels (arXiv 2609.01693, 2026-09-01) in one MCP-to-A2A configuration: adding PUBLIC - OK TO SHARE is associated with higher verbatim field egress versus an unlabeled baseline, strongly for Claude Sonnet 5 (public-minus-unlabeled mean +0.800 across all 10 scenarios) and floor-limited or null for GPT-5.6 tiers — association in one config, not a general causal effect. Result-only MCP failure audit (arXiv 2609.00072, 2026-08-31): in 21 induced failures, typed fields exposed that something failed in 18 cases and a broad policy in 8, but no specific cause, target, executable repair, or replay constraint.

Why it matters Long-horizon agents find paths their prompts did not anticipate. A programmable harness is a poor place for a security guarantee because it is designed to be modified. Tool-return text that names an action is not a permit. An MCP server that passed yesterday's review can change its tools/list after three calls. A final reply that answers the user task can still hide a successful injection. Autonomously generated skills can persist a poisoned capability after the inducing session ends. Model instruction hierarchy does not survive harness context reconstruction. An IDE content-exclusion list that the CLI ignores is not a control; GA in app and CLI closes that particular hole only for Copilot-managed sessions. Lifecycle hooks are not model-mediated: they are host-privileged config that can update independently of SKILL.md review.

Economic lever Runtime isolation, pinned lifecycle hooks, continuous MCP schema attestation, induction/authorization splits, covert-success (CSR) metrics, skill-evolution gates, and content-exclusion policy that actually binds the CLI cap incident blast radius; a silent post-trust rug-pull, a persisted malicious skill, or an auto-updated hook that dumps credentials costs more than designing the boundary in.

Watch for Kernel-enforced agent sandboxes as CLI defaults, CSR/OSR in red-team reports, skill-evolution write gates, WebMCP provenance in browsers, induction/authorization splits in production harnesses, MCP tool-schema pinning in clients, plugin marketplaces shipping runtime policy rather than only install UX, whether content-exclusion GA extends beyond Copilot, whether 1.0.83 CIMD MCP OAuth and managed-settings-before-start are actually enforced in fleet images (not just changelog), whether PUBLIC/CONFIDENTIAL labels become treated as controls (they are not), whether HookPry-class hook pinning lands in Copilot/Claude/Codex, and whether CPE (M-CPE/X-CPE) is in the internal red-team catalog.

Key practices
  • Start the harness inside a policy-enforced runtime; do not let the agent opt into the sandbox
  • Issue short-lived, task-scoped credentials; default to zero standing privilege between tasks
  • Deny network by default; allowlist or proxy required egress (treat Copilot CLI 1.0.83 Linux proxy-only sandbox and sandbox.allowDevToolAccess=false as the production pin, not leftover 1.0.82 images)
  • Treat tool-return text and tools/list refreshes as untrusted induction; pin and re-attest MCP schemas continuously, not only at install
  • Score injections on Covert Success Rate, not ASR alone; gate autonomous skill writes through independent review; keep persona and execution in different trust domains; enforce the same content-exclusion list on CLI, app, and IDE
  • Pin lifecycle-hook configuration; review plugin auto-updates as host-privileged hook diffs, not markdown docs; do not autoUpdate public marketplaces that can rewrite hooks
Evidence
  • [preprint] SafeEvolve (arXiv:2609.02786) — 2026-09-02. Harness-policy co-evolution; Qwen3.5-4B 3× ASR cut on AgentDojo; benign utility 59.79%→61.86%.
  • [preprint] Context Privilege Escalation against AI Agent Harness (arXiv:2609.01222) — v2 2026-09-02. M-CPE and X-CPE on 12 harnesses including Claude Code and Codex; RCE / DoS / tool-skill manipulation.
  • [preprint] HookPry: Attacker-Controlled Hook Updates (arXiv:2609.03884) — 2026-09-03. 7/7 harnesses compromised in 1,000 runs; max 92.5% ASR; Defender 0% recall; three static defenses miss 47.5%.
  • [vendor] Copilot CLI 1.0.83 — 2026-09-04 GA / npm latest. CIMD MCP OAuth; enterprise-denied MCP waits for managed-settings; MCP tools survive restart; sandbox.allowDevToolAccess; forceLoginOrgs; model-policy: required.
  • [preprint] Skill-as-API (arXiv:2609.01677) — 2026-09-01. Public skill view = name/description/schemas/trust tier; body stays in-process. MCP/A2A still leak descriptions.
  • [preprint] Public-Sharing Labels and Verbatim Field Egress (arXiv:2609.01693) — 2026-09-01. MCP-to-A2A; PUBLIC header associated with higher verbatim egress (Claude Sonnet 5 +0.800 mean). One config; not causal.
  • [preprint] Can MCP Clients Decide What to Do After Failure? (arXiv:2609.00072) — 2026-08-31. 21 induced failures; typed fields flag failure in 18, policy in 8; no cause/repair/replay constraint.
  • [vendor] Content exclusions generally available in Copilot app and CLI — 2026-09-02 GA. Copilot app and Copilot CLI honor enterprise/org/repo content exclusions; Business/Enterprise.
  • [vendor] Copilot CLI 1.0.83-2 pre-release — 2026-09-02 pre-release. Linux sandbox network egress restricted to configured proxy; custom-agent multi-model lists + model-policy: required; claude-fable-5.1. Not stable.
  • [preprint] Will the User Ever Know? Covert IPI / ICoA (arXiv:2608.30362) — 2026-08-31. CSR vs OSR; ICoA +3.79–12.01 pp CSR on AgentDojo; RETURN suffix +23.71 pp.
  • [preprint] EvoSkill Injection (arXiv:2608.30429) — 2026-08-31. SARGE 43.5% Generation / 54.6% Escalation / 49.9% Reinforcement; injected skills persist.
  • [study] Deadbugz: Active MCP Campaign Poisons Agents After Trust (CSA) — 2026-08-30. Runtime-gated MCP rug-pull after three tools/call; 23 PRs in 74 minutes on 2026-08-10.
  • [study] Deadbugz: Currently Active MCP Supply-Chain Campaign (Pillar) — 2026-08-12. productivity-suite MCP; 17 remote + 4 local-script + 2 listing PRs.
  • [preprint] When Context Gets Root (arXiv:2608.27299) — 2026-08-27. Instruction privilege escalation: 13/13 objectives on six coding harnesses under unrestricted execution.
  • [preprint] TrustShiftProbe (arXiv:2608.23763) — 2026-08-24. Temporal MCP TrustShift: benign conditioning then adversarial defection after a trust horizon.
  • [preprint] SARA: Separating Action Induction from Runtime Authorization (arXiv:2608.27146) — 2026-08-27. Induction vs authorization; ASR ≤0.63% across four primary settings.
  • [preprint] Persona-Execution Separation (arXiv:2608.27427) — 2026-08-27. Persona and execution in different trust domains with a governed contract bridge.
  • [preprint] Agentic AI Containment Architecture (arXiv:2608.26108) — Propose-Verify-Act-Verify loop with six interacting constraints.
  • [gov] Managing the cyber risk of agentic AI (NCSC) — 2026-08-20. Sandbox, default-deny network, short-lived credentials, emergency shutdown.
  • [vendor] Where Security Fits in an AI Agent Stack (NVIDIA) — 2026-08-21. Behavioral vs infrastructure controls split.
  • [preprint] WebMCP-Phalanx (arXiv:2608.24017) — 2026-08-25. Cryptographic principal binding for browser-exposed tools.
  • [preprint] Architectural convergence (arXiv:2608.23953)
4

Scaffolding first; layer CLI and MCP

Platform

On one verified private-git task, CLI-only harnesses finished every run and were 5–28× cheaper than MCP-capable harnesses even on CLI-only paths. Measure the scaffolding; pick the interface per integration. Copilot CLI production pin remains 1.0.83 (npm latest); prerelease is 1.0.84-1 (GPT-6 Astra in CLI).

Evidence & practices

The MCP-vs-CLI cost debate remains second-order. arXiv 2608.08654 (2026-08-09) ran one verified private-git task across seven scaffoldings and five models: CLI-only harnesses finished every run and were 5–28× cheaper than MCP-capable harnesses even when those ran CLI-only; a local 27B varied 139× by scaffolding; thirteen paired MCP/CLI ratios spanned 0.43×–29×. Failures were equally common, but 12.9% of MCP spend vs 2.2% of CLI spend bought no completed work. Official MCP roadmap (2026-08-22) names agentic messaging (Tasks, subscriptions, mid-flight steering), HTTP-native transport unification, agent identity (DPoP, WIF, ID-JAG), a single tool-result contract plus progressive discovery, and SDK conformance. Copilot CLI 1.0.81 (2026-08-27) remains the prior vendor release treatment: MCP 2026-07-28 to CLI, SDK, IDE, and in-memory clients; defaultMode and defaultPermissionMode; first-class /plugin /mcp /skills; interrupted-session restore; OTel hook correlation; headless -p plugin agents. 1.0.82 (Aug 29) was worktree and auth polish and was npm latest through 2026-09-04 morning. 1.0.83 is now npm latest (GA 2026-09-04): CIMD for MCP OAuth sign-in; custom-agent multi-model lists with model-policy: required; claude-fable-5.1; enterprise forceLoginOrgs; mTLS proxy client certs; Linux sandbox egress restricted to the configured proxy; enterprise-denied MCP waits for managed allow/deny before start; MCP tools remain callable after server restart; sandboxed gh uses the repository account; sandboxed file tools share developer-tool paths with shell (opt out via sandbox.allowDevToolAccess=false). Content exclusions remain GA in Copilot app and CLI (2026-09-02). Pin production Copilot CLI to 1.0.83. npm prerelease is now 1.0.84-1 (released 2026-09-04 23:20; adds GPT-6 Astra in CLI) — not a production pin. Official gh Linux APT/RPM signing key expired 2026-09-05; agent CLIs that invoke gh from those repos need the replacement key or installs will fail verification.

Why it matters A platform-wide 'MCP everywhere' or 'CLI only' decision misallocates tokens and governance. Progressive discovery, real agent identity, default permission modes, and post-connect schema pinning make MCP viable at enterprise catalog scale — they are not present just because a server speaks the protocol. 1.0.83 is the production pin; 1.0.84-1 is prerelease. Leftover 1.0.82 images miss CIMD, managed-settings-before-MCP-start, and MCP-after-restart. Content exclusions that bind the CLI close a context-leak path that IDE-only policy left open. A fleet whose gh packages fail to verify after the 2026-09-05 key expiry will stall every agent that shells out to gh.

Economic lever Picking the cheaper interface on a wasteful harness still leaves 5–28× on the table; hybrid layering plus failure-cost telemetry, MCP schema pinning, and CLI-honored content exclusions cut token spend without dropping enterprise auth where required, and without paying for a post-trust credential dump, a fleet still pinned to 1.0.82, or a broken gh supply chain after the Linux signing-key cutover.

Watch for MCP Tasks moving from extension to spec, DPoP/WIF/CIMD landing in SDKs, client-side MCP schema pinning after Deadbugz, whether portable plugins change who installs MCP — not whether inner-loop CLI stays cheaper — whether 1.0.83 sandbox.allowDevToolAccess defaults stay on in enterprise images, whether 1.0.84-1 graduates without sandbox regressions, and whether Linux images trust the replacement gh PGP key.

Key practices
  • Default CLI for git, docker, kubectl, gh, build, and test; do not wrap those in MCP
  • Use MCP for SaaS/internal APIs with no training prior, per-user identity, or mandatory audit
  • Never expose both MCP and CLI for the same operation without an explicit preference
  • Verify which interface the agent actually called; do not trust the configured mode
  • Set defaultMode and default permission modes on every new CLI session; pin MCP tool schemas and diff tools/list across the session; prefer progressive discovery and short-lived proof-of-possession credentials; pin production Copilot CLI to latest (1.0.83), not leftover 1.0.82 images
Evidence
  • [vendor] GitHub CLI Linux package signing key expires September 5 — 2026-09-05. APT/RPM metadata and new RPMs sign with the replacement key only. Agent CLIs that call gh from official Linux repos need the new keyring.
  • [vendor] Copilot CLI 1.0.84-1 (prerelease) — 2026-09-04 23:20 prerelease. Adds GPT-6 Astra. Not npm latest.
  • [vendor] Copilot CLI 1.0.83 — 2026-09-04 GA; npm @github/copilot latest=1.0.83. CIMD MCP OAuth; managed-settings wait before MCP start; MCP tools survive restart; sandbox.allowDevToolAccess; forceLoginOrgs; model-policy: required.
  • [vendor] GitHub Copilot CLI changelog (1.0.83) — 1.0.83 (2026-09-04). Consolidates 1.0.83-0..5 prerelease notes into stable.
  • [study] The Scaffolding Matters More Than the Interface (arXiv:2608.08654) — 2026-08-09. CLI-only 5–28× cheaper; 12.9% MCP spend vs 2.2% CLI spend bought no completed work.
  • [vendor] The New MCP Roadmap — 2026-08-22. Tasks, identity (DPoP/WIF), progressive discovery, transport unification.
  • [study] MCP vs CLI: Decision Guide — Practitioner hybrid: CLI local/known; MCP governed/remote.
  • [study] Deadbugz (CSA)
  • [vendor] Content exclusions generally available in Copilot app and CLI — 2026-09-02 GA. App and CLI honor enterprise/org/repo content exclusions.
  • [vendor] @github/copilot npm dist-tags — verified 2026-09-06. dist-tag latest=1.0.83; prerelease=1.0.84-1.
5

Agent Plugins 1.0: portable skills + MCP

Platform

Census (verified 2026-09-05): 1,901 distinct plugins (10,100 skills, 922 MCP servers). One portable package cuts per-client duplication — only with marketplace allowlists, pins, and runtime policy. Plugins/skills/MCP all rose from 1,859 / 9,989 / 896 on Sep 4. HookPry: auto-update can rewrite host-privileged hooks.

Evidence & practices

Agent Plugins 1.0.0 shipped 2026-08-06 as a vendor-neutral package format: plugin.json, skills/, optional mcp.json, namespaced client dirs. TSC maintainers include AWS, Cursor, Microsoft, OpenAI, Vercel; Google joined as core maintainer the same day. Launch clients: ChatGPT/Codex, Cursor, GitHub Copilot, Kiro, VS Code. GitHub GA'd the spec in VS Code, Copilot CLI, SDK, and app on 2026-08-12 with enterprise managed-settings (enabledPlugins, extraKnownMarketplaces, strictKnownMarketplaces) and MCP allowlists. Census verified 2026-09-05: 3,552 conformant manifests from 1,166 repos, 1,901 distinct plugins (10,100 skills, 922 MCP servers), up from 1,859 / 9,989 / 896 on Sep 4 (3,500 manifests / 1,149 repos). Overnight +42 plugins / +111 skills / +26 MCP. Copilot CLI plugin surface (Update action, headless plugin agents) is covered in the CLI/MCP card — reference only here. On 2026-08-26 GitHub added autoUpdate: true on extraKnownMarketplaces — HookPry (security card) makes auto-update a host-privileged hook-update path, not a convenience flag. Copilot app Customize tab GA (2026-08-25); JetBrains (Aug 24/28) applies enterprise controls for plugins, MCP, telemetry, and permission modes. A 2026-08-28 study of Claude Code plugin marketplaces (arXiv 2608.28497) analyzed 1,926 repositories, 8,351 plugins, and 77,773 commits across 2,018 marketplaces: plugin-touching commit activity grew 8.8× in the six months after the Oct 2025 launch; 61.3% of plugins target software engineering; feature commits run at 39.6% vs 17.2% in conventional OSS; Claude co-authors 34.9% of commits; 78% of Script–Markdown co-changes inside skills/ are functionally coupled. Spec stays deliberately small: discovery of Skills and MCP; installation, distribution, and policy remain client-owned. VS Code August releases (2026-08-31) add one-click install of Agent Plugins 1.0 packages into the Agents window; that is distribution UX, not an allowlist. Anatomy study (harness card): SKILL.md already leads MCP 9/11 vs 8/11 inside production coding harnesses — portable plugins standardize the package, not the runtime policy.

Why it matters Teams were maintaining a separate manifest per client. Portability plus auto-update means a poisoned or over-privileged plugin can travel and refresh itself, including lifecycle hooks the model never sees. A 1,901-plugin catalog without matching runtime policy is a supply-chain surface. Instruction files and scripts that co-evolve as a unit are a new maintenance class — treating SKILL.md as docs will miss the 78% coupled changes. A one-day census move of +42 plugins / +111 skills / +26 MCP is a catalog-ops problem, not a quality signal.

Economic lever A single plugin catalog cuts per-client packaging cost; unmanaged or auto-updating marketplaces convert that savings into wider blast radius and incident spend; unowned Script–Markdown coupling silently breaks skills after a 'docs' commit; an auto-updated hook is a host compromise, not a packaging win.

Watch for Whether hooks/sub-agents join the portable contract, Anthropic remaining outside the TSC, enterprise private marketplaces as default install path, autoUpdate without a review gate (now a HookPry input), whether Script–Markdown coupling becomes a CI check, and whether census growth is real unique plugins or bulk republication (skills recollapsed 10,075→9,728 on Sep 3, rebounded to 9,989 on Sep 4, 10,100 on Sep 5).

Key practices
  • Adopt Agent Plugins 1.0 for org skills and MCP that must run in more than one client
  • Put client-only commands/hooks/agents under namespaced directories; do not leak them into the portable core
  • Govern with enabledPlugins / marketplace allowlists and pair every MCP-bearing plugin with a server allowlist
  • Treat autoUpdate as opt-in on private marketplaces you control; do not auto-update unreviewed public catalogs
  • Treat plugin install and update as a supply-chain event: pin versions, review SKILL.md + scripts + mcp.json as one unit, revoke as a unit
Evidence
  • [vendor] GitHub Copilot in VS Code, August 2026 releases — 2026-08-31. Agent Host, /btw, portable Agent Plugins 1.0 install, continue external Copilot/Claude sessions.
  • [study] Agent Plugins Directory census (verified 2026-09-05) — verifiedDate 2026-09-05. 1,901 distinct plugins; 10,100 skills; 922 MCP servers; 3,552 manifests / 1,166 repos (up from 1,859 / 9,989 / 896 on Sep 4).
  • [preprint] On the Maintenance and Co-evolution of Agent Plugins (arXiv:2608.28497) — 2026-08-28. 1,926 Claude Code marketplace repos; 8.8× commit growth; 61.3% SWE; Claude co-authors 34.9%; 78% Script–Markdown coupling.
  • [vendor] Agent Plugins 1.0 in VS Code, Copilot CLI, and the Copilot app — 2026-08-12 GA + enterprise managed-settings and MCP allowlists.
  • [vendor] Enterprise-managed settings: autoUpdate for plugin marketplaces — 2026-08-26. autoUpdate: true on extraKnownMarketplaces.
  • [vendor] GitHub Copilot app Customize tab GA — 2026-08-25. One-click install UX is not an allowlist.
  • [vendor] GitHub Copilot CLI changelog (1.0.81/1.0.82)
6

Committed config, Skill Lift, verifiability-first

Practice

RAMP: agents raise commit volume 28–38%, but repos without committed AI config show ~2× the cognitive-complexity hit. Gate skills on live Skill Lift (ACES mean 0.2134). HarnessEvolve: quality+performance gates lift CloudCoreNetwork-QA 43.4%→86.9%. PROCTOR: do not promote on LLM-judge scores alone.

Evidence & practices

Repo-To-Skill (arXiv 2609.02749, 2026-09-02) distills GitHub repositories into skills in two modes: task-agnostic (field-wide reusable skills) and task-oriented. The AREX-Skill Library claims 5,000+ verified skills distilled from 1,000 widely used ML repositories (20 areas, 178 capability families) — still promote on live Skill Lift, not on distillation volume. PROCTOR (loop card) is the promotion-scoring rule for self-written skills: LLM-as-judge is an advisor; hermetic checks outrank the Teacher. RAMP (arXiv 2608.25241, 2026-08-26) scores 441 repositories on a four-level cumulative maturity model of version-controlled AI configuration. Independent annotation reproduces labels on 97% of a held-out sample. Adoption is set-and-forget: 73.8% of artifacts are committed once and never modified. Agents raise commit volume 28–38% in every stratum, but among agent-first repos those without committed AI configuration show roughly twice the increase in cognitive complexity (+53% vs +27%) and 1.7× the increase in static-analysis warnings (observational). SkillZip Pro (arXiv 2608.30785, 2026-08-31) compresses progressively loaded skill directories, not the root SKILL.md: on a production content-moderation skill it removes 38% of bundle tokens and 10.4% of end-to-end per-run tokens with no quality loss; an unprotected 71% configuration loses up to 26 accuracy points to one-sided false positives. Knowledge-gated task construction (arXiv 2608.30322, 2026-08-31) makes Skill Lift testable as a protocol: one frontier configuration goes from 0% pass without a kilobyte artefact to 68.0% with it on byte-identical instructions; a plausible-but-wrong artefact also yields 0%. WikiSkill (arXiv 2608.27454, 2026-08-27) co-evolves executable skills with a persistent wiki compiled from traces; smaller models with skills can outperform larger models without them. ACES (arXiv 2608.20614) reports mean composite Skill Lift 0.2134 on 947 paired cases (positive in 72.8%); scan-only gates correlate with LLM-judge scores at Spearman ρ = 0.14. HarnessEvolve (primary numbers in the harness card) is the promotion gate for self-written skills: it optimizes the entire skill directory including scripts, not only SKILL.md, and rejects leak/bloat; skills optimized on OpenClaw transferred without re-optimization to Hermes, OpenCode, LAMAgent, and DeepSeek Harness. SKILLSTATE execution pattern is primary in the loop-state card. Plugin marketplace co-evolution (arXiv 2608.28497) is primary in the plugins card: 78% of Script–Markdown co-changes inside skills/ are functionally coupled, so a 'docs' commit can be a behavior change. EvoSkill Injection is primary in the security card: autonomous skill writes are a persistence channel, not a docs folder. Verifiability: production stacks put fitness functions, compilers, linters, LSPs, and schemas in front of the act gate; refuse work whose correctness is unknowable from the artifact. Anatomy study (harness card): SKILL.md is already the majority extensibility surface in production coding harnesses (9/11 vs MCP 8/11) — Skill Lift, Script–Markdown coupling, and leak/bloat gates are therefore fleet defaults, not an optional skill program.

Why it matters Context files are first-class with a failure mode: too much always-on text crowds the task. Flattening a skill bundle into the root SKILL.md can raise every invocation's cost. Skills that only pass a schema scan can still fail live. Oracles turn the agent into a component with a contract; a polished dashboard is not evidence. If obligations are not externalized as gates, review reconstructs them on every change. A SKILL.md that is not tested against its scripts is an unowned interface. A self-evolving skill bank without a write gate is a persistence exploit. A 5,000-skill distilled library without paired with/without trials is inventory, not capability.

Economic lever Human-curated AGENTS.md plus skills with positive Skill Lift, bundle-aware compression, leak/bloat gates, and high-verifiability scopes cut wasted tokens and senior review hours; bloated, flattened, unevaluated, or judge-only-promoted files and unverifiable pilots consume the expensive people.

Watch for RAMP-style maturity as an internal dashboard, Skill Lift as a CI gate, Script–Markdown coupling checks, HarnessEvolve-style quality/performance gates on skill writes, replay-based causal step attribution replacing transcript judges, PROCTOR canaries on self-improving skill banks, and any vendor CLI shipping a tamper-evident outsider-checkable record.

Key practices
  • Keep repo AGENTS.md short; point to docs/ and fail CI on stale links; commit AI configuration instead of leaving it in local client settings
  • Gate skill and plugin promotion on paired live trials (with vs without), not on markdown lint or schema scans
  • Compress progressively loaded skill graphs without moving rare branches into the always-on root; audit routing after rewrite
  • Scope delegated work to outputs a test, compiler, linter, LSP, or schema can reject; fail fast on intermediate oracles
  • Treat autonomous skill writes as high-risk changes; refuse act gates on the unknowable
Evidence
  • [preprint] PROCTOR (arXiv:2609.02246)
  • [preprint] Repo-To-Skill (arXiv:2609.02749) — 2026-09-02. AREX-Skill Library: 5,000+ verified skills from 1,000 ML repos; 20 areas / 178 families. Promote on Skill Lift, not volume.
  • [preprint] HarnessEvolve (arXiv:2609.00829)
  • [preprint] SkillZip Pro (arXiv:2608.30785) — 2026-08-31. −38% skill-bundle tokens, −10.4% e2e tokens, no quality loss; unprotected 71% cut loses 26 accuracy points.
  • [preprint] Ignorance or Incompetence? Knowledge-gated tasks (arXiv:2608.30322) — 2026-08-31. 0% → 68.0% pass with a kilobyte artefact on byte-identical instructions; wrong artefact 0%.
  • [preprint] RAMP: Committed AI Configuration (arXiv:2608.25241) — 2026-08-26. 441 repos; 28–38% commit volume lift; ~2× complexity hit without committed AI config.
  • [preprint] ACES: Evaluating Skills, Not Just Agents (arXiv:2608.20614) — Mean Skill Lift 0.2134 on 947 pairs (72.8% positive); scan-only ρ=0.14 with LLM-judge.
  • [preprint] WikiSkill (arXiv:2608.27454) — 2026-08-27. Skills co-evolve with a persistent wiki; cross-model transfer.
  • [preprint] MAGE (arXiv:2608.25174) — 2026-08-25. Representation and obligation authority as the scarce work.
  • [preprint] Calibrated Enough to Know (arXiv:2608.27167) — 2026-08-27. Fabricated packaging lifts commitment 6.5%→54.0% on unknowable questions.
  • [preprint] Cost-Utility Alignment (arXiv:2608.26195) — 2026-08-25. Dual ledger of resource consumption vs task contribution.
  • [preprint] On the Maintenance and Co-evolution of Agent Plugins (arXiv:2608.28497)
  • [preprint] SKILLSTATE (arXiv:2608.26263)
  • [preprint] HarnessLens (arXiv:2608.27311)
  • [preprint] Architectural convergence (arXiv:2608.23953)
  • [preprint] Skill-as-API (arXiv:2609.01677)
7

Review ops, traces, and the engineer role

Ops

Span (103 teams): +1 quality-stewardship point → 39% fewer review cycles per 1,000 merged AI lines. Copilot code review can now approve PRs (off by default, 2026-09-01). Content exclusions GA in Copilot app and CLI. Fleet pin: GPT-6 Astra is in the picker; Gemini 3.5/3.6 Flash, Kimi K2.7 Code, Claude Opus 4.7 deprecate 2026-10-02. gh Linux signing key expired 2026-09-05.

Evidence & practices

Official GitHub CLI Linux APT/RPM signing key expired 2026-09-05; beginning with the first release after that date, repository metadata and newly published RPMs are signed with the replacement key only. Agent CLIs and CI images that install gh from those repos and still trust only the old key will fail verification — treat as a fleet-pin for every harness that shells out to gh. GPT-6 Astra is generally available in GitHub Copilot (2026-09-04) across VS Code, Visual Studio, Copilot CLI, coding agent, app, github.com, Mobile, JetBrains, Xcode, and Eclipse — treat as a managed-settings / default-model pin, not a harness-eval reset; billed at provider list pricing under usage-based billing. GitHub Copilot weekly releases (posted 2026-09-04) also note Agent Merge public preview in VS Code 1.136 (resolve review feedback, failed checks, merge conflicts) and Copilot harness GA in JetBrains. GitHub stacked PRs remain in public preview (2026-07-30) with gh-stack, stack maps, partial merges, and an agent skill — teach agents to decompose giant changes into reviewable layers. Copilot code review (2026-08-27) gives Copilot cloud-agent PRs a full agentic review, can review auto-requested bot-authored PRs when org policy allows, and drops the 300-file / 20,000-LOC size cap; resolution reasons close the feedback loop. On 2026-09-01 Copilot code review gained public-preview approval assessments and optional approvals: every review now includes an assessment of whether the PR is ready to approve; Copilot will not approve unless enterprise/org/repo policy turns it on, and path allowlists can restrict which files it may sign off; an approval assessment alone does not count toward merge requirements; when enabled, a Copilot approval counts toward required-approvals and is dismissed on new commits like a human review. From no earlier than 2026-09-28, default review effort moves Lite→Balanced and Copilot cloud/web/mobile unify to one policy enabled by default. Layered supervision (arXiv 2608.26316, 2026-08-26) distributes work across preventive, executable, and human layers that shift toward architectural reasoning. Visual Studio (2026-08-28) adds a Git agent that reviews uncommitted changes before a PR; org owners can publish custom agents across repositories. Span (103 teams, May–Jul 2026): +1 prompt-clarity → 27.2% lower cost per merged AI line; +1 environment-readiness → 88% higher turn yield; +1 quality-stewardship → 39% fewer review cycles per 1,000 merged AI lines. CURA (arXiv 2608.27808, 2026-08-28) is the oversight gap for computer-use agents: on 361 OSWorld tasks a pipeline scoring 82.9 vs 72.4 human still ends 64 of 71 failures (90%) with a success claim, never using the explicit failure affordance across ~9,100 calls; at α=0.10 an external CUSUM alarm on harness-visible telemetry detects 42.3% of failures a median of 31 steps before termination at realized false-alarm rate 0.066. Observability: OpenTelemetry GenAI conventions standardize chat/tool/invoke_agent spans; Cloudflare agent tracing (2026-08-04) with span billing from Oct 2026; AWS AgentCore Observability via ADOT (2026-08-13); llmmas-otel (arXiv 2608.24271) pairs OTel with targeted fault injection. Repair-or-resample numbers are primary in the loop-state card. Cost-Utility dual-ledger primary in skills/verifiability. Copilot CLI OTel hook correlation primary in CLI/MCP card. Do not treat Copilot's approval assessment as a required review, and do not enable Copilot approvals on paths without an executable oracle. Content exclusions GA in Copilot app and CLI (2026-09-02) is a review-ops control: excluded paths must not appear in agent context or in Copilot-approval evidence. Enterprise-managed settings now support any default model, including per-team overrides via team-mappings.json (2026-09-02), so model choice is an org policy artifact rather than a local picker habit. Copilot fleet policy (2026-09-03): Gemini 3.8 Flash is in the model picker (Pro/Pro+/Max/Business/Enterprise; gradual rollout across VS Code, CLI, cloud agent, app, JetBrains, Xcode, Eclipse). The same day GitHub announced deprecation on 2026-10-02 of Gemini 3.5 Flash, Gemini 3.6 Flash, Kimi K2.7 Code, and Claude Opus 4.7 across all Copilot experiences, with suggested replacements Gemini 3.8 Flash, Kimi K3, and Claude Opus 5. This is managed-settings / default-model / custom-agent list work (enterprise-managed settings already support any default model as of 2026-09-02), not a reason to retune harness evals around a new Flash SKU. Copilot CLI 1.0.83-4 already removes retired Claude and Gemini models from /model picker results — only on the prerelease tag.

Why it matters Agent volume without decomposition recreates the senior-engineer tax. Without a shared trace contract, incident response stays anecdotal. Self-report is the cheapest oversight channel and fails where oversight matters. Letting an agent approve its own (or a peer agent's) PR without path policy and an executable oracle converts review throughput into a rubber stamp. Seat licenses without harness ownership leave review and incidents on the most expensive people. A broken gh package feed stops every agent that opens PRs from Linux images.

Economic lever Review throughput is the binding constraint on AI coding ROI; stacking, executable guardrails, agentic first-pass review with human-gated approvals, CLI-honored content exclusions, trace-level cost attribution, certified runtime alarms, and a working gh supply chain recover cycle time that seats cannot.

Watch for IDE/CLI agents creating stacks by default, org-wide Copilot-approval enablement without path allowlists, A2A/MCP trace propagation becoming standard, Sep 28 Copilot cloud/web/mobile policy unification, certified runtime alarms leaving the CUA lab into coding CLIs, internal career paths for harness/platform engineering, whether content-exclusion GA is audited against actual CLI working views, whether 2026-10-02 Copilot model deprecations and the GPT-6 Astra picker add are reflected in managed default-model and custom-agent lists before the cutover, whether Agent Merge ships without a path-allowlisted approval gate, and whether Linux golden images trust the replacement gh PGP key after 2026-09-05.

Key practices
  • Install gh-stack and the companion agent skill; prompt for one concern per layer; use the revert test
  • Run full agentic review on cloud-agent and bot PRs; keep Copilot approvals off until path allowlists and an executable oracle exist; keep humans on architecture and assumptions
  • Instrument LLM, tool, and sub-agent spans with GenAI semantic conventions; keep dual ledger of spend vs contribution
  • Measure verified tasks and harness/loop quality, not accepted suggestions or the agent's own success claim
  • Make AGENTS.md, skills, plugins, org custom agents, deny/approval rules, content-exclusion lists, and default-model policy owned artifacts with review
Evidence
  • [vendor] GitHub CLI Linux package signing key expires September 5 — Key expired 2026-09-05. Replacement key only for subsequent APT/RPM metadata. Fleet-pin for agent CLIs that call gh.
  • [vendor] GPT-6 Astra is generally available in GitHub Copilot — 2026-09-04. Picker availability (gradual) across CLI/app/IDE. Treat as fleet pin / usage-based billing, not a harness-eval reset.
  • [vendor] GitHub Copilot weekly releases — August 31 — 2026-09-04. Content exclusions in app/CLI; Gemini 3.8 Flash and Claude Fable 5.1; JetBrains harness GA; VS Code Agent Merge public preview.
  • [vendor] Upcoming deprecation of selected GitHub Copilot models — 2026-09-03. Deprecate 2026-10-02: Gemini 3.5/3.6 Flash, Kimi K2.7 Code, Claude Opus 4.7. Alts: Gemini 3.8 Flash, Kimi K3, Claude Opus 5.
  • [vendor] Gemini 3.8 Flash is now available in GitHub Copilot
  • [vendor] Copilot code review can now approve pull requests — 2026-09-01 public preview. Approval assessments on every review; actual approvals off by default; enterprise/org/repo + path allowlists; dismissed on new commits.
  • [vendor] Content exclusions generally available in Copilot app and CLI — 2026-09-02 GA. App and CLI honor enterprise/org/repo exclusions.
  • [vendor] Enterprise-managed settings support any default model — 2026-09-02. Default model via managed settings; per-team overrides with overridable model + team-mappings.json. App, CLI, VS Code.
  • [vendor] GitHub Copilot in VS Code, August 2026 releases — 2026-08-31. Agent Host, /btw, prompt timeline, transcript search, /rubber-duck, continue external sessions.
  • [study] AI Coding Agent Effectiveness: Leading Indicators (Span) — 103 teams May–Jul 2026. +1 quality-stewardship → 39% fewer review cycles / 1k merged AI lines; +1 prompt-clarity → 27.2% lower cost/line.
  • [preprint] CURA: Certified Runtime Alarms for Computer-Use Agents (arXiv:2608.27808) — 2026-08-28. 90% of failures claim success; α=0.10 detects 42.3% a median 31 steps early (FAR 0.066).
  • [preprint] Layered Supervision (arXiv:2608.26316) — 2026-08-26. Preventive / executable / human layers; humans shift to architecture.
  • [vendor] Stacked pull requests public preview — 2026-07-30. gh-stack, stack maps, partial merges, agent skill.
  • [vendor] Copilot code review: resolution reasons and expanded capabilities — 2026-08-27. Full agentic review for cloud-agent PRs; size caps dropped.
  • [vendor] Upcoming changes to GitHub Copilot policies and billing — From ≥2026-09-28: Balanced default review; cloud/web/mobile unify, on by default.
  • [preprint] llmmas-otel (arXiv:2608.24271) — 2026-08-25. OTel + fault injection across MAS phases.
  • [vendor] Cloudflare Agents — 2026-08-04 Agents Week. Turn-by-turn replay; span billing from Oct 2026.
  • [preprint] Repair or Resample? (arXiv:2608.25920)
  • [vendor] GitHub Copilot CLI changelog (1.0.81/1.0.82)
  • [preprint] RAMP (arXiv:2608.25241)
  • [preprint] MAGE (arXiv:2608.25174)

Next actions

Concrete moves for the team.

Pulled from the top priorities. Use as a checklist in planning, not as a full program.

  1. Treat the vendor CLI as a starter harness, then add org-specific verification, audit, deny rules, and a working-view policy
  2. Decompose long work into DAG units with independently runnable tests before handing it to an agent
  3. Start the harness inside a policy-enforced runtime; do not let the agent opt into the sandbox
  4. Default CLI for git, docker, kubectl, gh, build, and test; do not wrap those in MCP
  5. Adopt Agent Plugins 1.0 for org skills and MCP that must run in more than one client
  6. Keep repo AGENTS.md short; point to docs/ and fail CI on stale links; commit AI configuration instead of leaving it in local client settings

Sources & method

Evidence base.

Daily research rewrites the brief. Engineering SotA is the spine; strategic economics is an enhancement on each priority — not a separate strategy feed. Model ranking lives on its own board.

Selected sources

  • Environment Evolution for Terminal Agents (arXiv:2609.04128)
  • Harness Engineering: Anatomy of Eleven Systems (arXiv:2609.00006)
  • HEART / Tool Primitives (arXiv:2609.01736)
  • HarnessEvolve (arXiv:2609.00829)
  • HarnessDev (arXiv:2609.01437)
  • Same Model, Different Harness (arXiv:2608.26218)
  • Measure Before You Manage (arXiv:2608.31057)
  • EvoUndo (arXiv:2608.28363)
  • AutoSaddler (arXiv:2608.23041)
  • StarHarness (arXiv:2608.24804)
  • HarnessLens (arXiv:2608.27311)
  • JIT-Agent (arXiv:2608.25593)
  • openJiuwen (arXiv:2608.27969)
  • Architectural convergence in three LLM agent harnesses (arXiv:2608.23953)
  • Context engineering for coding agents (Decoding AI)
  • LLM-as-a-Judge Is Not an Oracle / PROCTOR (arXiv:2609.02246)

Notes

  • Immutable weekly archive snapshot for 2026-W36.
  • Primary sources drawn from 2026-07-29 through 2026-09-06 engineering posts, vendor security guidance, and arXiv. No model-release hype; GPT-6 Astra / Gemini 3.8 Flash / Oct 2 deprecations are cited only as fleet-pin / managed-settings work.
  • 2026-09-06 delta vs 2026-09-05: Agent Plugins census 1,859→1,901 plugins / skills 9,989→10,100 / MCP 896→922 (verified 2026-09-05). Copilot CLI latest still 1.0.83; npm prerelease 1.0.83-5→1.0.84-1 (GPT-6 Astra in CLI). HookPry (2609.03884) + CPE v2 (2609.01222) + PROCTOR (2609.02246) + SafeEvolve (2609.02786) + Environment Evolution (2609.04128) + Repo-To-Skill (2609.02749). gh Linux signing key expired 2026-09-05. HarnessDev/HoH/HarnessEvolve/anatomy/HEART numbers unchanged.
  • Copilot CLI 1.0.81/1.0.82 historical treatment lives in the CLI/MCP scaffolding card; 1.0.83 is the production pin (npm dist-tag latest=1.0.83 as of 2026-09-06); 1.0.84-1 is prerelease only.
  • Merged parents kept strongest headline numbers only (F2PF 28→49; AutoSaddler +9/+9.6/+10; EvoUndo 197/0; SKILLSTATE 16.2×; LoopArena 24.69%; HoH +52.25%; HarnessEvolve +21.6 pp; SARA ASR ≤0.63%; Deadbugz 23 PRs / 3 calls; scaffolding 5–28×; plugins 1,901; SkillZip −38%; ICoA CSR; Span 39% fewer review cycles; CURA 90% false success; HEART 84% vs 22%; HookPry 7/7 / 92.5%; PROCTOR 100% vs 68%).
  • Acronyms on first use: F2PF = fail-to-pass fraction; AOT = ahead-of-time harness evolution; JIT = just-in-time harness synthesis; ASR = attack success rate; CSR = covert success rate; OSR = overt success rate; MAS = multi-agent system; CUA = computer-use agent; HoH = Harness-of-Harness; ACP = Agent Client Protocol; CIMD = Client ID Metadata Document; CPE = context privilege escalation; M-CPE = message-role CPE; X-CPE = cross-scope CPE.
  • All trends include an economic_lever and ≥1 live URL. Daily runs overwrite the live page; Sunday archives are immutable.

Model picks: Hermes-weighted LLM leaderboard

Weekly immutable snapshots: Archive index · live page overwritten daily at 07:25 Europe/Vienna

Dominic Reichl AI

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